STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101168093Protein kinase domain-containing protein. (411 aa)    
Predicted Functional Partners:
tnfaip3
Tumor necrosis factor, alpha-induced protein 3.
   
  0.948
LOC100125536
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.941
casp8
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.941
LOC101169506
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
    
 0.926
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
    
 0.926
LOC101154981
Toll-like receptor adaptor molecule 1.
   
  0.925
LOC101172229
Calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 1; Belongs to the protein kinase superfamily.
    
 
0.922
ripk1
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
  
  
 
0.913
LOC101157756
Cytochrome b-245, beta polypeptide (chronic granulomatous disease).
    
 0.906
LOC101159287
Calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma 2.
    
0.906
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.