STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2L5E0_ORYLAProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (150 aa)    
Predicted Functional Partners:
tab1
TGF-beta activated kinase 1/MAP3K7 binding protein 1.
   
 0.579
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.548
tab3
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
    
 0.501
tab2
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
    
 0.501
tnfaip3
Tumor necrosis factor, alpha-induced protein 3.
   
  0.477
fadd
Uncharacterized protein.
   
  0.476
mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.457
ubc
Ubiquitin B.
    
  0.456
map2k7
Mitogen-activated protein kinase kinase 7.
   
 0.455
tradd
Tnfrsf1a-associated via death domain.
    
 0.455
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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