Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CNNM3Cyclin and CBS domain divalent metal cation transport mediator 3. (735 aa)    
Predicted Functional Partners:
arl15
ADP-ribosylation factor-like 15a.
   
 
 0.708
LOC101159200
Transient receptor potential cation channel, subfamily M, member 6.
    
 
 0.707
slc41a1
Solute carrier family 41 member 1.
      
 0.675
LOC101158870
Sulfate anion transporter 1; Mediates sulfate transport with high affinity. Mediates oxalate transport. Mediates bicarbonate transport. Does not accept succinate as cosubstrate; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
  
 
 0.666
slc13a1
Solute carrier family 13 member 1.
      
 0.652
gmps
Guanine monophosphate synthase.
    
 0.602
ptp4a1
Protein tyrosine phosphatase 4A1.
    
 
 0.558
LOC101164411
Protein tyrosine phosphatase 4A2b.
    
 
 0.558
trpm7
Transient receptor potential cation channel, subfamily M, member 7.
    
 
 0.558
rnf123
Ring finger protein 123.
      
 0.555
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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