STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
faxdc2Fatty acid hydroxylase domain containing 2; Belongs to the sterol desaturase family. (342 aa)    
Predicted Functional Partners:
H2N0C8_ORYLA
Cytochrome P450, family 51; Belongs to the cytochrome P450 family.
   
 0.913
sc5d
Sterol-C5-desaturase; Belongs to the sterol desaturase family.
   
 
0.904
sqle
Squalene epoxidase a.
   
 
 0.903
sigmar1
Sigma non-opioid intracellular receptor 1.
   
 0.840
3bhsd
3Beta_HSD domain-containing protein; Belongs to the 3-beta-HSD family.
   
 0.827
LOC101161165
Phosphoethanolamine methyltransferase.
   
 
 0.823
fdft1
Farnesyl-diphosphate farnesyltransferase 1.
  
 
 0.821
nsdhl
NAD(P) dependent steroid dehydrogenase-like; Belongs to the 3-beta-HSD family.
   
 0.806
ERG28
Ergosterol biosynthesis 28 homolog.
   
 
 0.797
HSD17B7
Hydroxysteroid 17-beta dehydrogenase 7.
   
 0.778
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.