STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101163086Zgc:112294. (216 aa)    
Predicted Functional Partners:
drc7
Uncharacterized protein.
      
 0.676
tmem231
Transmembrane protein 231.
    
 
 0.628
tmem218
Transmembrane protein 218.
   
  
 0.610
ift52
Intraflagellar transport 52 homolog (Chlamydomonas).
      
 0.601
Dnali1
Dynein, axonemal, light intermediate chain 1.
      
 0.601
b9d1
B9 protein domain 1.
    
 
 0.589
ttll9
Tubulin tyrosine ligase-like family, member 9.
      
 0.589
armc9
Armadillo repeat containing 9.
      
 0.588
nphp1
Nephronophthisis 1.
      
 0.567
tmem67
Transmembrane protein 67.
   
  
 0.565
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.