STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nanpN-acetylneuraminic acid phosphatase. (244 aa)    
Predicted Functional Partners:
CMAS
Cytidine monophosphate N-acetylneuraminic acid synthetase.
     
 0.946
nans
N-acetylneuraminic acid synthase a.
  
 
 0.943
LOC101175526
Radial spoke head 3.
   
 
 0.905
Psat1
Phosphoserine aminotransferase 1.
  
 
 0.725
gne
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
  
 
 0.687
klhl3
Kelch-like family member 3.
   
 
 0.657
klhl2
Kelch-like family member 2.
   
 
 0.657
LOC101168447
BTB domain-containing protein.
   
 
 0.627
KLHL12
BTB domain-containing protein.
   
 
 0.627
IPP
Intracisternal A particle-promoted polypeptide.
   
 
 0.625
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.