Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC101158195Cholinergic receptor, nicotinic, alpha 4b. (646 aa)    
Predicted Functional Partners:
LOC101162690
Cholinergic receptor, nicotinic, beta 3b (neuronal).
  
 
0.983
LOC101168098
Cholinergic receptor, nicotinic, beta polypeptide 3a.
  
 
0.983
LOC101173433
Cholinergic receptor, nicotinic, alpha 5.
  
 
0.983
LOC101163178
Cholinergic receptor, nicotinic, beta 5b.
  
 
 
0.974
LOC101168846
Cholinergic receptor, nicotinic, beta 5a.
  
 
 
0.974
chrnb2
Cholinergic receptor, nicotinic, beta 2.
  
 
 
0.974
LOC101162933
Cholinergic receptor nicotinic alpha 6 subunit.
  
 
0.971
LOC101168601
Cholinergic receptor, nicotinic, alpha 6.
  
 
0.970
LOC101166241
Cholinergic receptor, nicotinic, epsilon.
  
 
 
0.967
LOC101159423
Cholinergic receptor, nicotinic, beta 4 (neuronal).
  
 
 
0.967
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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