STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101158195Cholinergic receptor, nicotinic, alpha 4b. (646 aa)    
Predicted Functional Partners:
LOC101166241
Cholinergic receptor, nicotinic, epsilon.
  
 
0.708
LOC101159423
Cholinergic receptor, nicotinic, beta 4 (neuronal).
  
 
0.706
LOC101157251
Cholinergic receptor, nicotinic, beta 1 (muscle).
  
 
0.703
LOC101157009
Cholinergic receptor, nicotinic, beta 1 (muscle) like.
  
 
0.701
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
  
0.688
CHRNA1-2
Cholinergic receptor nicotinic alpha 1 subunit.
  
0.688
LOC101162456
Si:ch73-380n15.2.
  
0.686
LOC101167346
Uncharacterized protein.
  
0.685
LOC101155633
Uncharacterized protein.
  
0.684
LOC101168927
Uncharacterized protein.
  
0.683
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.