STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
txndc15Thioredoxin domain containing 15. (350 aa)    
Predicted Functional Partners:
pign
Phosphatidylinositol glycan anchor biosynthesis, class N.
    
   0.673
fam92a
Family with sequence similarity 92 member A1.
      
 0.639
camlg
Calcium signal-modulating cyclophilin ligand; Likely involved in the mobilization of calcium as a result of the TCR/CD3 complex interaction. Binds to cyclophilin B.
   
  
 0.638
tmx1
Thioredoxin-related transmembrane protein 1.
      
 0.631
MARCHF6
Membrane associated ring-CH-type finger 6.
    
   0.623
LOC101168653
RING-CH-type domain-containing protein.
    
   0.623
lrrcc1
Leucine rich repeat and coiled-coil centrosomal protein 1.
      
 0.612
slc25a48
Solute carrier family 25 member 48; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.604
iqce
Uncharacterized protein.
      
 0.596
nxn
Thioredoxin domain-containing protein.
      
 0.595
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.