Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101156095Glycine receptor, alpha 4a; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (455 aa)    
Predicted Functional Partners:
LOC101154926
Glycine receptor, beta a; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  0.689
GLRB
Glycine receptor beta; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  0.689
LOC101156053
Molybdopterin molybdenumtransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released.
    
 
 0.541
gphn
Gephyrin b.
    
 
 0.541
CHRNA9
Cholinergic receptor nicotinic alpha 9 subunit.
  
  
0.478
chrna9
Cholinergic receptor, nicotinic, alpha 9.
  
  
0.474
slc39a7
Solute carrier family 39 member 7.
      
 0.429
LOC101157800
Proteolipid protein 1b.
   
  
 0.417
LOC101171500
Proteolipid protein 1a.
   
  
 0.417
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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