Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101160009Calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 2; Belongs to the protein kinase superfamily. (465 aa)    
Predicted Functional Partners:
mpp1
Membrane protein, palmitoylated 1; Belongs to the MAGUK family.
 
  
  0.833
LOC101169874
Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.
   
 0.759
LOC101175170
Uncharacterized protein.
   
 0.759
LOC101155449
Uncharacterized protein.
   
 0.744
LOC101164086
Actinin, alpha 2b.
   
 0.744
calm3
Calmodulin-A; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.
   
 0.744
LOC100049422
Uncharacterized protein; Belongs to the calmodulin family.
   
 0.744
actn3
Actinin alpha 3b.
   
 0.744
actn1
Actinin, alpha 1.
   
 0.744
LOC100049419
Calmodulin.
   
 0.744
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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