STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101160321Forkhead box K2. (606 aa)    
Predicted Functional Partners:
bap1
Ubiquitin carboxyl-terminal hydrolase.
    
 0.777
ogt
O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1.
    
 0.695
uchl5
Ubiquitin carboxyl-terminal hydrolase.
    
 0.627
hcfc2
Host cell factor C2.
    
 0.621
hcfc1
Host cell factor C1a.
    
 0.621
Asxl1
ASXL transcriptional regulator 1.
   
 0.523
ENSORLP00000041305
HARE-HTH domain-containing protein.
   
 0.523
KDM1B
Lysine demethylase 1B.
    
 0.510
mbd5
Methyl-CpG binding domain protein 5.
    
 0.509
LOC101173824
Uncharacterized protein.
    
 0.480
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.