Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101160321Forkhead box K2. (606 aa)    
Predicted Functional Partners:
foxk1
Uncharacterized protein.
  
  
 
0.902
LOC101160853
Uncharacterized protein.
  
  
 
0.901
bap1
Ubiquitin carboxyl-terminal hydrolase.
    
 0.888
hcfc2
Host cell factor C2.
    
 0.735
hcfc1
Host cell factor C1a.
    
 0.735
uchl5
Ubiquitin carboxyl-terminal hydrolase.
    
 0.731
KDM1B
Lysine demethylase 1B.
   
 0.729
Asxl1
ASXL transcriptional regulator 1.
   
 0.690
ENSORLP00000041305
HARE-HTH domain-containing protein.
   
 0.690
mbd5
Methyl-CpG binding domain protein 5.
    
 0.677
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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