Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101159122Transmembrane protein 91. (100 aa)    
Predicted Functional Partners:
vrtn
Vertebrae development associated.
      
 0.606
pgghg
Protein-glucosylgalactosylhydroxylysine glucosidase.
      
 0.536
lin52
Lin-52 DREAM MuvB core complex component.
      
 0.499
ENSORLP00000044940
Purkinje cell protein 4 like 1.
      
 0.498
wdr92
WD repeat domain 92.
      
 0.464
AREL1
Apoptosis resistant E3 ubiquitin protein ligase 1.
      
 0.464
spag17
Uncharacterized protein.
      
 0.463
pgrmc2
Progestin receptor membrane component 2; Belongs to the cytochrome b5 family.
      
 0.463
gtf2a1
General transcription factor IIA, 1.
      
 0.463
LOC101161515
Gsg1-like 2b.
      
 0.430
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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