hells protein (Oryzias latipes) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Coexpression

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[Homology]

Score

hells

Helicase, lymphoid specific. (853 aa)

Predicted Functional Partners:

pole3

0.887

fancm

0.788

ENSORLP00000033531

0.785

BAZ1A

0.777

baz1b

0.777

BAZ2B

0.777

baz2b

0.777

cdc6

0.777

baz2a

0.777

exo1

0.775

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAZ1A	ENSORLP00000033531	ENSORLP00000012999	ENSORLP00000033531	Bromodomain adjacent to zinc finger domain 1A.	CHDCT2 domain-containing protein.	0.444
BAZ1A	baz1b	ENSORLP00000012999	ENSORLP00000014501	Bromodomain adjacent to zinc finger domain 1A.	Bromodomain adjacent to zinc finger domain, 1B.	0.421
BAZ1A	hells	ENSORLP00000012999	ENSORLP00000001208	Bromodomain adjacent to zinc finger domain 1A.	Helicase, lymphoid specific.	0.777
BAZ1A	pole3	ENSORLP00000012999	ENSORLP00000000708	Bromodomain adjacent to zinc finger domain 1A.	CBFD_NFYB_HMF domain-containing protein.	0.948
BAZ2B	ENSORLP00000033531	ENSORLP00000029161	ENSORLP00000033531	Bromodomain adjacent to zinc finger domain 2B.	CHDCT2 domain-containing protein.	0.439
BAZ2B	hells	ENSORLP00000029161	ENSORLP00000001208	Bromodomain adjacent to zinc finger domain 2B.	Helicase, lymphoid specific.	0.777
BAZ2B	pole3	ENSORLP00000029161	ENSORLP00000000708	Bromodomain adjacent to zinc finger domain 2B.	CBFD_NFYB_HMF domain-containing protein.	0.718
ENSORLP00000033531	BAZ1A	ENSORLP00000033531	ENSORLP00000012999	CHDCT2 domain-containing protein.	Bromodomain adjacent to zinc finger domain 1A.	0.444
ENSORLP00000033531	BAZ2B	ENSORLP00000033531	ENSORLP00000029161	CHDCT2 domain-containing protein.	Bromodomain adjacent to zinc finger domain 2B.	0.439
ENSORLP00000033531	baz1b	ENSORLP00000033531	ENSORLP00000014501	CHDCT2 domain-containing protein.	Bromodomain adjacent to zinc finger domain, 1B.	0.460
ENSORLP00000033531	baz2a	ENSORLP00000033531	ENSORLP00000041453	CHDCT2 domain-containing protein.	Bromodomain adjacent to zinc finger domain, 2A.	0.439
ENSORLP00000033531	baz2b	ENSORLP00000033531	ENSORLP00000036445	CHDCT2 domain-containing protein.	Bromodomain adjacent to zinc finger domain, 2Ba.	0.439
ENSORLP00000033531	exo1	ENSORLP00000033531	ENSORLP00000002230	CHDCT2 domain-containing protein.	Exonuclease 1.	0.431
ENSORLP00000033531	fancm	ENSORLP00000033531	ENSORLP00000018174	CHDCT2 domain-containing protein.	Uncharacterized protein.	0.694
ENSORLP00000033531	hells	ENSORLP00000033531	ENSORLP00000001208	CHDCT2 domain-containing protein.	Helicase, lymphoid specific.	0.785
ENSORLP00000033531	pole3	ENSORLP00000033531	ENSORLP00000000708	CHDCT2 domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.460
baz1b	BAZ1A	ENSORLP00000014501	ENSORLP00000012999	Bromodomain adjacent to zinc finger domain, 1B.	Bromodomain adjacent to zinc finger domain 1A.	0.421
baz1b	ENSORLP00000033531	ENSORLP00000014501	ENSORLP00000033531	Bromodomain adjacent to zinc finger domain, 1B.	CHDCT2 domain-containing protein.	0.460
baz1b	hells	ENSORLP00000014501	ENSORLP00000001208	Bromodomain adjacent to zinc finger domain, 1B.	Helicase, lymphoid specific.	0.777
baz1b	pole3	ENSORLP00000014501	ENSORLP00000000708	Bromodomain adjacent to zinc finger domain, 1B.	CBFD_NFYB_HMF domain-containing protein.	0.718