STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2L5X6_ORYLAPoly (ADP-ribose) glycohydrolase, like. (403 aa)    
Predicted Functional Partners:
parp1
Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.
  
 
 0.948
parp2
Poly [ADP-ribose] polymerase.
  
 
 0.931
xrcc1
X-ray repair complementing defective repair in Chinese hamster cells 1.
    
 
 0.887
parp3
Poly [ADP-ribose] polymerase.
    
 0.830
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 
 0.723
H2MVB5_ORYLA
Poly [ADP-ribose] polymerase.
    
 0.688
Parp4
Uncharacterized protein.
    
 0.688
wdfy3
WD repeat and FYVE domain containing 3.
 
      0.667
ENSORLP00000033776
Si:cabz01080528.1.
    
 0.659
LOC101156200
Von Willebrand factor A domain containing 5B2.
    
 0.659
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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