STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPLLHeterogeneous nuclear ribonucleoprotein L like. (500 aa)    
Predicted Functional Partners:
LOC101159823
Poly(rC) binding protein 2.
   
 0.808
PCBP2
Uncharacterized protein.
   
 0.808
LOC101171014
Heterogeneous nuclear ribonucleoprotein D.
   
 0.795
srsf5
Serine and arginine rich splicing factor 5a.
   
 0.783
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.729
LOC101167466
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.729
ptprc
Protein tyrosine phosphatase receptor type C.
    
 
 0.683
H2M705_ORYLA
TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.676
HNRNPUL1
Heterogeneous nuclear ribonucleoprotein U like 1.
   
 0.669
hnrnpu
Heterogeneous nuclear ribonucleoprotein Ub.
   
 0.669
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.