Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ncapd3Non-SMC condensin II complex, subunit D3. (1403 aa)    
Predicted Functional Partners:
ncapg2
Non-SMC condensin II complex, subunit G2.
   
 0.999
smc2
Structural maintenance of chromosomes protein.
   
 0.999
smc4
Structural maintenance of chromosomes protein.
   
 0.999
ncaph2
Non-SMC condensin II complex, subunit H2.
   
 0.999
ncaph
Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes.
   
 0.990
ncapg
Non-SMC condensin I complex, subunit G.
   
 
 0.875
Ncapd2
Uncharacterized protein.
   
  
 0.852
mcph1
Uncharacterized protein.
   
 0.803
brca1
Uncharacterized protein.
   
 0.783
rb1
Retinoblastoma 1.
   
 0.783
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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