STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101160748Hyaluronan and proteoglycan link protein 1b. (353 aa)    
Predicted Functional Partners:
LOC101165132
Uncharacterized protein.
   
0.758
LOC101156813
Aggrecan b.
   
0.758
LOC101165399
Uncharacterized protein.
 
  
 0.546
Chsy1
Hexosyltransferase.
     
 0.526
ENSORLP00000032656
Uncharacterized protein.
   
 0.472
dcx
Uncharacterized protein.
      
 0.452
LOC101173740
Uncharacterized protein.
    
0.447
ENSORLP00000030350
Versican a.
    
0.447
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.