Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fstl4Follistatin-like 4. (844 aa)    
Predicted Functional Partners:
C18orf32
Chromosome 18 open reading frame 32.
      
 0.566
ptprg
Carbonic anhydrase XVI b.
   
 
 0.548
SLITRK1
SLIT and NTRK like family member 1.
   
 0.499
bmp15
Bone morphogenetic protein 15.
     
 0.480
H2M2S3_ORYLA
Protein tyrosine phosphatase receptor type Ga.
    
   0.477
hsd17b8
Hydroxysteroid (17-beta) dehydrogenase 8.
      
 0.476
ccdc157
Coiled-coil domain containing 157.
      
 0.469
ubr4
Ubiquitin protein ligase E3 component n-recognin 4.
    
   0.458
fst
Follistatin a.
   
 
 0.425
LOC101156435
Contactin associated protein like 3.
   
 0.423
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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