Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LOC100125506 | LOC101156489 | ENSORLP00000008821 | ENSORLP00000017196 | Retinoid x receptor, beta b. | Nuclear receptor coactivator 3. | 0.745 |
| LOC100125506 | LOC101173939 | ENSORLP00000008821 | ENSORLP00000009821 | Retinoid x receptor, beta b. | Nuclear receptor subfamily 1, group D, member 4a. | 0.412 |
| LOC100125506 | LOC101175434 | ENSORLP00000008821 | ENSORLP00000007267 | Retinoid x receptor, beta b. | Nuclear receptor coactivator. | 0.745 |
| LOC100125506 | NCOA3 | ENSORLP00000008821 | ENSORLP00000015195 | Retinoid x receptor, beta b. | Nuclear receptor coactivator. | 0.745 |
| LOC100125506 | med1 | ENSORLP00000008821 | ENSORLP00000043584 | Retinoid x receptor, beta b. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.791 |
| LOC100125506 | ncoa1 | ENSORLP00000008821 | ENSORLP00000029475 | Retinoid x receptor, beta b. | Nuclear receptor coactivator 1. | 0.745 |
| LOC100125506 | ncoa2 | ENSORLP00000008821 | ENSORLP00000010164 | Retinoid x receptor, beta b. | Nuclear receptor coactivator. | 0.745 |
| LOC100125506 | ncor1 | ENSORLP00000008821 | ENSORLP00000015017 | Retinoid x receptor, beta b. | Nuclear receptor corepressor 1. | 0.807 |
| LOC100125506 | ncor2 | ENSORLP00000008821 | ENSORLP00000017559 | Retinoid x receptor, beta b. | Nuclear receptor corepressor 2. | 0.807 |
| LOC100125506 | vdralpha | ENSORLP00000008821 | ENSORLP00000001310 | Retinoid x receptor, beta b. | Uncharacterized protein. | 0.718 |
| LOC101156489 | LOC100125506 | ENSORLP00000017196 | ENSORLP00000008821 | Nuclear receptor coactivator 3. | Retinoid x receptor, beta b. | 0.745 |
| LOC101156489 | LOC101173939 | ENSORLP00000017196 | ENSORLP00000009821 | Nuclear receptor coactivator 3. | Nuclear receptor subfamily 1, group D, member 4a. | 0.662 |
| LOC101156489 | med1 | ENSORLP00000017196 | ENSORLP00000043584 | Nuclear receptor coactivator 3. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.595 |
| LOC101156489 | ncor1 | ENSORLP00000017196 | ENSORLP00000015017 | Nuclear receptor coactivator 3. | Nuclear receptor corepressor 1. | 0.532 |
| LOC101156489 | ncor2 | ENSORLP00000017196 | ENSORLP00000017559 | Nuclear receptor coactivator 3. | Nuclear receptor corepressor 2. | 0.511 |
| LOC101156489 | vdralpha | ENSORLP00000017196 | ENSORLP00000001310 | Nuclear receptor coactivator 3. | Uncharacterized protein. | 0.746 |
| LOC101173939 | LOC100125506 | ENSORLP00000009821 | ENSORLP00000008821 | Nuclear receptor subfamily 1, group D, member 4a. | Retinoid x receptor, beta b. | 0.412 |
| LOC101173939 | LOC101156489 | ENSORLP00000009821 | ENSORLP00000017196 | Nuclear receptor subfamily 1, group D, member 4a. | Nuclear receptor coactivator 3. | 0.662 |
| LOC101173939 | LOC101175434 | ENSORLP00000009821 | ENSORLP00000007267 | Nuclear receptor subfamily 1, group D, member 4a. | Nuclear receptor coactivator. | 0.662 |
| LOC101173939 | NCOA3 | ENSORLP00000009821 | ENSORLP00000015195 | Nuclear receptor subfamily 1, group D, member 4a. | Nuclear receptor coactivator. | 0.662 |
page 1 of 5