STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lamp2Lysosomal-associated membrane protein 2. (486 aa)    
Predicted Functional Partners:
lamp1
Lysosomal associated membrane protein 1a.
  
0.990
cd63
Tetraspanin.
    
 0.925
H2MBF1_ORYLA
Lysosomal associated membrane protein 1b.
  
 
0.906
fastkd2
FAST kinase domains 2.
      
 0.657
becn1
Beclin 1.
      
 0.652
sqstm1
Sequestosome 1.
    
 
 0.587
rptor
Regulatory associated protein of MTOR, complex 1.
    
 
 0.574
ENSORLP00000036037
Uncharacterized protein; Belongs to the heat shock protein 70 family.
   
 0.572
HSPA2
Heat shock 70 kDa protein 1; Belongs to the heat shock protein 70 family.
   
 0.569
eea1
Early endosome antigen 1.
      
 0.560
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.