STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101165296Ciliary rootlet coiled-coil, rootletin family member 2. (1372 aa)    
Predicted Functional Partners:
plk2
Serine/threonine-protein kinase PLK.
   
 0.618
plk3
Serine/threonine-protein kinase PLK.
   
 0.618
PLK1
Serine/threonine-protein kinase PLK.
   
 0.618
bora
Bora aurora kinase A activator.
   
 
 0.513
haus3
HAUS augmin-like complex, subunit 3.
   
 
 0.487
aurkb
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.443
aurka
Aurora kinase A; Belongs to the protein kinase superfamily.
   
 0.443
haus1
HAUS augmin-like complex, subunit 1.
    
 0.425
LOC101154777
Cyclin-dependent kinase 11B.
   
 
  0.414
cdk10
Cyclin-dependent kinase 10; Belongs to the protein kinase superfamily.
   
 
  0.414
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.