STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
wsb2WD repeat and SOCS box containing 2. (465 aa)    
Predicted Functional Partners:
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
   
 0.929
kansl3
KAT8 regulatory NSL complex subunit 3.
    
 0.901
rbbp5
Retinoblastoma binding protein 5.
   
 0.900
kansl2
KAT8 regulatory NSL complex subunit 2.
    
 0.894
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.866
LOC101154889
Cullin 5; Belongs to the cullin family.
    
 0.866
mcrs1
Microspherule protein 1.
    
 0.865
sgf29
SAGA complex associated factor 29.
    
 0.858
yeats2
YEATS domain containing 2.
    
 0.858
H2N0U4_ORYLA
Dpy-30 histone methyltransferase complex regulatory subunit.
   
 0.856
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.