STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101166735H2A histone family, member Y2. (411 aa)    
Predicted Functional Partners:
aifm1
Apoptosis inducing factor mitochondrion associated 1.
  
 0.912
LOC101156984
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
  0.901
LOC101161131
Lysine (K)-specific demethylase 6A, like.
  
 0.829
H2ME95_ORYLA
Lysine (K)-specific demethylase 6A.
  
 0.829
ENSORLP00000039316
Uncharacterized protein.
  
 0.829
LOC101164833
Lysine (K)-specific demethylase 6B, b.
  
 0.828
LOC101160692
Lysine (K)-specific demethylase 6B, a.
  
 0.828
glyr1
Glyoxylate reductase 1 homolog (Arabidopsis).
    
 
 0.806
LOC101155571
Histone H2B; Belongs to the histone H2B family.
   
 0.794
LOC101155571-2
Histone H2B 1/2.
   
 0.794
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.