vsig10 protein (Oryzias latipes) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

vsig10

Uncharacterized protein. (366 aa)

Predicted Functional Partners:

lrrc73

0.765

ankrd13d

0.757

tepsin

0.723

ttc17

0.717

polr3d

0.644

nprl2

0.600

st3gal5

0.583

shq1

0.581

c12h9orf16

0.561

H2M9K6_ORYLA

0.508

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H2M9K6_ORYLA	vsig10	ENSORLP00000015196	ENSORLP00000001347	DUF3730 domain-containing protein.	Uncharacterized protein.	0.508
ankrd13d	c12h9orf16	ENSORLP00000004194	ENSORLP00000008830	Ankyrin repeat domain 13 family, member D.	Expressed sequence BC139872.	0.587
ankrd13d	lrrc73	ENSORLP00000004194	ENSORLP00000003968	Ankyrin repeat domain 13 family, member D.	Leucine rich repeat containing 73.	0.870
ankrd13d	nprl2	ENSORLP00000004194	ENSORLP00000037434	Ankyrin repeat domain 13 family, member D.	NPR2 like, GATOR1 complex subunit.	0.728
ankrd13d	tepsin	ENSORLP00000004194	ENSORLP00000035273	Ankyrin repeat domain 13 family, member D.	TEPSIN adaptor related protein complex 4 accessory protein.	0.798
ankrd13d	vsig10	ENSORLP00000004194	ENSORLP00000001347	Ankyrin repeat domain 13 family, member D.	Uncharacterized protein.	0.757
c12h9orf16	ankrd13d	ENSORLP00000008830	ENSORLP00000004194	Expressed sequence BC139872.	Ankyrin repeat domain 13 family, member D.	0.587
c12h9orf16	lrrc73	ENSORLP00000008830	ENSORLP00000003968	Expressed sequence BC139872.	Leucine rich repeat containing 73.	0.613
c12h9orf16	tepsin	ENSORLP00000008830	ENSORLP00000035273	Expressed sequence BC139872.	TEPSIN adaptor related protein complex 4 accessory protein.	0.587
c12h9orf16	vsig10	ENSORLP00000008830	ENSORLP00000001347	Expressed sequence BC139872.	Uncharacterized protein.	0.561
lrrc73	ankrd13d	ENSORLP00000003968	ENSORLP00000004194	Leucine rich repeat containing 73.	Ankyrin repeat domain 13 family, member D.	0.870
lrrc73	c12h9orf16	ENSORLP00000003968	ENSORLP00000008830	Leucine rich repeat containing 73.	Expressed sequence BC139872.	0.613
lrrc73	nprl2	ENSORLP00000003968	ENSORLP00000037434	Leucine rich repeat containing 73.	NPR2 like, GATOR1 complex subunit.	0.754
lrrc73	tepsin	ENSORLP00000003968	ENSORLP00000035273	Leucine rich repeat containing 73.	TEPSIN adaptor related protein complex 4 accessory protein.	0.853
lrrc73	vsig10	ENSORLP00000003968	ENSORLP00000001347	Leucine rich repeat containing 73.	Uncharacterized protein.	0.765
nprl2	ankrd13d	ENSORLP00000037434	ENSORLP00000004194	NPR2 like, GATOR1 complex subunit.	Ankyrin repeat domain 13 family, member D.	0.728
nprl2	lrrc73	ENSORLP00000037434	ENSORLP00000003968	NPR2 like, GATOR1 complex subunit.	Leucine rich repeat containing 73.	0.754
nprl2	tepsin	ENSORLP00000037434	ENSORLP00000035273	NPR2 like, GATOR1 complex subunit.	TEPSIN adaptor related protein complex 4 accessory protein.	0.695
nprl2	vsig10	ENSORLP00000037434	ENSORLP00000001347	NPR2 like, GATOR1 complex subunit.	Uncharacterized protein.	0.600
polr3d	vsig10	ENSORLP00000014513	ENSORLP00000001347	Polymerase (RNA) III (DNA directed) polypeptide D.	Uncharacterized protein.	0.644