Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EspnlEspin like a. (622 aa)    
Predicted Functional Partners:
espn
Espin.
 
     
0.835
ENSORLP00000041234
ANK_REP_REGION domain-containing protein.
 
      0.830
LOC101156094
Whirlin b.
    
 0.673
whrn
Whirlin a.
    
 0.673
GRXCR2
Glutaredoxin and cysteine rich domain containing 2.
     
 0.619
myo3a
Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.586
myo3b
Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.586
LOC101167616
Usher syndrome 1C.
   
 0.581
LOC101155758
Uncharacterized protein.
    
 0.574
brca2
BRCA2 DNA repair associated.
    
 0.565
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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