STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AXLAXL receptor tyrosine kinase. (939 aa)    
Predicted Functional Partners:
pros1
Protein S.
     
 0.878
gas6
Growth arrest-specific 6.
    
 0.807
grb2
Growth factor receptor-bound protein 2b.
   
 0.652
H2LWC6_ORYLA
Uncharacterized protein.
      
 0.622
LOC101157838
C1q domain-containing protein.
   
 0.590
ccn1
Cellular communication network factor 1.
   
  
 0.584
mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.567
p2ry12
Purinergic receptor P2Y12.
     
 0.563
msh2
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
    
 
 0.532
socs1
Suppressor of cytokine signaling 1.
    
 0.517
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.