STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101163233Uncharacterized protein. (626 aa)    
Predicted Functional Partners:
atf7ip2
Fibronectin type-III domain-containing protein.
   
 0.895
atf7ip
Activating transcription factor 7 interacting protein.
   
 0.895
arl14ep
ADP-ribosylation factor-like 14 effector protein.
    
 
 0.855
camkmt
Calmodulin-lysine N-methyltransferase.
     
 0.692
plod2
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2.
    
  0.661
plod1
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a.
    
  0.661
Plod3
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3.
    
  0.661
mphosph8
Uncharacterized protein.
   
 0.600
YTHDC2
YTH domain containing 2.
   
 
 0.599
eed
Embryonic ectoderm development protein.
   
 0.598
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.