STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101157298Glucosaminyl (N-acetyl) transferase family member 7. (427 aa)    
Predicted Functional Partners:
fam199x
Family with sequence similarity 199, X-linked.
      
 0.723
eogt
EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase.
      
 0.623
b4gat1
Beta-1,4-glucuronyltransferase 1.
      
 0.582
man2c1
Mannosidase, alpha, class 2C, member 1.
      
 0.577
mgat5
Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase.
     
 0.543
st3gal3
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
      
 0.535
LOC101170979
Uncharacterized protein.
    
   0.512
mest
Mesoderm specific transcript.
      
 0.510
LOC101169310
DEAH (Asp-Glu-Ala-His) box polypeptide 32b.
      
 0.498
LOC101170859
DEAQ box RNA-dependent ATPase 1.
      
 0.498
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.