STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ocrlOCRL inositol polyphosphate-5-phosphatase. (971 aa)    
Predicted Functional Partners:
LOC101170855
SAC1 like phosphatidylinositide phosphatase a.
 
  
 0.989
LOC101167819
SAC1 like phosphatidylinositide phosphatase b.
 
  
 0.988
synj1
Synaptojanin 1.
    
0.961
inpp4a
Inositol polyphosphate-4-phosphatase type I Aa.
    
 0.959
pik3c2b
Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta; Belongs to the PI3/PI4-kinase family.
   
 
 0.955
pik3c2g
Phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma; Belongs to the PI3/PI4-kinase family.
   
 
 0.955
pik3c2a
Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha; Belongs to the PI3/PI4-kinase family.
   
 
 0.955
LOC101163663
Phosphatidylinositol-4-phosphate 5-kinase, type I, beta b.
     
 0.936
inpp4b
Inositol polyphosphate-4-phosphatase type II B.
    
 0.923
LOC101166362
Inositol polyphosphate-4-phosphatase type I Ab.
    
 0.923
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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