Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
H2L6P1_ORYLALHFPL tetraspan subfamily member 4a. (233 aa)    
Predicted Functional Partners:
LOC101164350
Protocadherin-related 15b.
    
 0.584
cdhr5
Uncharacterized protein.
    
 0.584
pcdh15
Protocadherin-related 15a.
    
 0.584
LOC101172638
Uncharacterized protein.
    
 0.584
TMC1
Transmembrane channel-like protein.
   
 0.570
LOC101167136
Transmembrane channel-like protein.
   
 0.570
tmie
Transmembrane inner ear.
     
 0.557
LOC101166471
Calcium and integrin binding family member 2.
     
 0.496
LOC101169107
Uncharacterized protein.
     
 0.496
cib3
Calcium and integrin binding family member 3.
     
 0.496
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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