STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrps30Mitochondrial ribosomal protein S30. (426 aa)    
Predicted Functional Partners:
Mrps27
Mitochondrial ribosomal protein S27.
   
 0.990
dap3
Death associated protein 3.
   
 0.989
mrps9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
 0.988
mrps22
Mitochondrial ribosomal protein S22.
   
 0.988
mrps23
Mitochondrial ribosomal protein S23.
   
 0.985
mrps7
Mitochondrial ribosomal protein S7.
   
 0.983
mrps15
Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
   
 0.983
mrps21
Mitochondrial ribosomal protein S21.
    
 0.982
mrps17
Mitochondrial ribosomal protein S17.
   
 0.981
mrps31
Mitochondrial ribosomal protein S31.
   
 0.980
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.