Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101167460Histidine triad nucleotide binding protein 2. (181 aa)    
Predicted Functional Partners:
taf1b
TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B.
    
 0.916
tbp
Uncharacterized protein.
    
 0.761
tbpl2
TATA box binding protein like 2.
    
 0.761
LOC101174576
Uncharacterized protein.
    
 0.761
rrn3
RRN3 homolog, RNA polymerase I transcription factor.
    
 0.758
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
  0.707
gcna
Germ cell nuclear acidic peptidase.
    
 0.696
kars1
Lysine--tRNA ligase.
   
 0.660
sirt1
Deacetylase sirtuin-type domain-containing protein.
    
  0.607
mnat1
CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex.
    
 0.604
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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