pcid2 protein (Oryzias latipes) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:

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Gene Fusion

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Experiments

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[Homology]

Score

pcid2

PCI domain containing 2. (393 aa)

Predicted Functional Partners:

mcm3ap

0.973

LOC101173720

0.961

ENSORLP00000036114

0.958

leng8

0.953

sac3d1

0.921

cetn3

0.859

LOC101170769

0.858

crppa

0.790

nxf1

0.704

rae1

0.685

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSORLP00000036114	LOC101170769	ENSORLP00000036114	ENSORLP00000007981	SEM1 26S proteasome complex subunit.	Centrin, EF-hand protein, 2.	0.435
ENSORLP00000036114	LOC101173720	ENSORLP00000036114	ENSORLP00000035209	SEM1 26S proteasome complex subunit.	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	0.798
ENSORLP00000036114	cetn3	ENSORLP00000036114	ENSORLP00000001266	SEM1 26S proteasome complex subunit.	Centrin 3.	0.616
ENSORLP00000036114	crppa	ENSORLP00000036114	ENSORLP00000020909	SEM1 26S proteasome complex subunit.	CDP-L-ribitol pyrophosphorylase A.	0.435
ENSORLP00000036114	leng8	ENSORLP00000036114	ENSORLP00000027759	SEM1 26S proteasome complex subunit.	Leukocyte receptor cluster (LRC) member 8.	0.914
ENSORLP00000036114	mcm3ap	ENSORLP00000036114	ENSORLP00000018779	SEM1 26S proteasome complex subunit.	Minichromosome maintenance complex component 3 associated protein.	0.953
ENSORLP00000036114	nxf1	ENSORLP00000036114	ENSORLP00000003062	SEM1 26S proteasome complex subunit.	Zgc:153681.	0.496
ENSORLP00000036114	pcid2	ENSORLP00000036114	ENSORLP00000001519	SEM1 26S proteasome complex subunit.	PCI domain containing 2.	0.958
ENSORLP00000036114	sac3d1	ENSORLP00000036114	ENSORLP00000020985	SEM1 26S proteasome complex subunit.	Si:zfos-452g4.1.	0.915
LOC101170769	ENSORLP00000036114	ENSORLP00000007981	ENSORLP00000036114	Centrin, EF-hand protein, 2.	SEM1 26S proteasome complex subunit.	0.435
LOC101170769	LOC101173720	ENSORLP00000007981	ENSORLP00000035209	Centrin, EF-hand protein, 2.	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	0.915
LOC101170769	mcm3ap	ENSORLP00000007981	ENSORLP00000018779	Centrin, EF-hand protein, 2.	Minichromosome maintenance complex component 3 associated protein.	0.831
LOC101170769	pcid2	ENSORLP00000007981	ENSORLP00000001519	Centrin, EF-hand protein, 2.	PCI domain containing 2.	0.858
LOC101170769	sac3d1	ENSORLP00000007981	ENSORLP00000020985	Centrin, EF-hand protein, 2.	Si:zfos-452g4.1.	0.780
LOC101173720	ENSORLP00000036114	ENSORLP00000035209	ENSORLP00000036114	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	SEM1 26S proteasome complex subunit.	0.798
LOC101173720	LOC101170769	ENSORLP00000035209	ENSORLP00000007981	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	Centrin, EF-hand protein, 2.	0.915
LOC101173720	cetn3	ENSORLP00000035209	ENSORLP00000001266	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	Centrin 3.	0.959
LOC101173720	crppa	ENSORLP00000035209	ENSORLP00000020909	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	CDP-L-ribitol pyrophosphorylase A.	0.890
LOC101173720	leng8	ENSORLP00000035209	ENSORLP00000027759	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	Leukocyte receptor cluster (LRC) member 8.	0.439
LOC101173720	mcm3ap	ENSORLP00000035209	ENSORLP00000018779	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	Minichromosome maintenance complex component 3 associated protein.	0.995