Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
INSCINSC spindle orientation adaptor protein. (545 aa)    
Predicted Functional Partners:
gpsm2
Uncharacterized protein.
    
 
 0.836
sh3pxd2b
SH3 and PX domains 2B.
      
 0.786
LOC101155154
Glucagon b.
      
 0.760
scaf1
SR-related CTD-associated factor 1.
   
  
 0.742
copb1
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
      
 0.723
hmmr
Hyaluronan-mediated motility receptor (RHAMM).
     
 0.722
stk33
Serine/threonine kinase 33; Belongs to the protein kinase superfamily.
    
 
 0.689
tenm2
Teneurin transmembrane protein 2.
      
 0.682
LOC101160237
Activity-dependent neuroprotector homeobox b.
      
 0.671
LOC101166856
Uncharacterized protein.
      
 0.658
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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