sox6a protein (Oryzias latipes) - STRING interaction network

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query proteins and first shell of interactors

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

sox6a

HMG box domain-containing protein. (814 aa)

Predicted Functional Partners:

ctnnb1

0.694

sox5

0.645

TNNT1

0.604

LOC101166305

0.604

LOC101171502

0.595

LOC101173369

0.595

trip12

0.497

dmy

0.483

H2LWG8_ORYLA

0.475

atp2a1

0.451

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H2LWG8_ORYLA	LOC101166305	ENSORLP00000010456	ENSORLP00000041379	Troponin I type 1a (skeletal, slow).	Troponin T type 1 (skeletal, slow).	0.936
H2LWG8_ORYLA	TNNT1	ENSORLP00000010456	ENSORLP00000037019	Troponin I type 1a (skeletal, slow).	Troponin T1, slow skeletal type.	0.937
H2LWG8_ORYLA	atp2a1	ENSORLP00000010456	ENSORLP00000015224	Troponin I type 1a (skeletal, slow).	Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.	0.445
H2LWG8_ORYLA	sox6a	ENSORLP00000010456	ENSORLP00000001551	Troponin I type 1a (skeletal, slow).	HMG box domain-containing protein.	0.475
LOC101166305	H2LWG8_ORYLA	ENSORLP00000041379	ENSORLP00000010456	Troponin T type 1 (skeletal, slow).	Troponin I type 1a (skeletal, slow).	0.936
LOC101166305	TNNT1	ENSORLP00000041379	ENSORLP00000037019	Troponin T type 1 (skeletal, slow).	Troponin T1, slow skeletal type.	0.549
LOC101166305	atp2a1	ENSORLP00000041379	ENSORLP00000015224	Troponin T type 1 (skeletal, slow).	Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.	0.429
LOC101166305	sox6a	ENSORLP00000041379	ENSORLP00000001551	Troponin T type 1 (skeletal, slow).	HMG box domain-containing protein.	0.604
LOC101171502	LOC101173369	ENSORLP00000004535	ENSORLP00000015702	Uncharacterized protein.	Junction plakoglobin a.	0.548
LOC101171502	ctnnb1	ENSORLP00000004535	ENSORLP00000031608	Uncharacterized protein.	Catenin (cadherin-associated protein), beta 1.	0.900
LOC101171502	sox5	ENSORLP00000004535	ENSORLP00000034239	Uncharacterized protein.	HMG box domain-containing protein.	0.478
LOC101171502	sox6a	ENSORLP00000004535	ENSORLP00000001551	Uncharacterized protein.	HMG box domain-containing protein.	0.595
LOC101173369	LOC101171502	ENSORLP00000015702	ENSORLP00000004535	Junction plakoglobin a.	Uncharacterized protein.	0.548
LOC101173369	ctnnb1	ENSORLP00000015702	ENSORLP00000031608	Junction plakoglobin a.	Catenin (cadherin-associated protein), beta 1.	0.982
LOC101173369	sox5	ENSORLP00000015702	ENSORLP00000034239	Junction plakoglobin a.	HMG box domain-containing protein.	0.478
LOC101173369	sox6a	ENSORLP00000015702	ENSORLP00000001551	Junction plakoglobin a.	HMG box domain-containing protein.	0.595
TNNT1	H2LWG8_ORYLA	ENSORLP00000037019	ENSORLP00000010456	Troponin T1, slow skeletal type.	Troponin I type 1a (skeletal, slow).	0.937
TNNT1	LOC101166305	ENSORLP00000037019	ENSORLP00000041379	Troponin T1, slow skeletal type.	Troponin T type 1 (skeletal, slow).	0.549
TNNT1	atp2a1	ENSORLP00000037019	ENSORLP00000015224	Troponin T1, slow skeletal type.	Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.	0.429
TNNT1	sox6a	ENSORLP00000037019	ENSORLP00000001551	Troponin T1, slow skeletal type.	HMG box domain-containing protein.	0.604