STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppp5cSerine/threonine-protein phosphatase. (491 aa)    
Predicted Functional Partners:
LOC101169506
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
   
 0.955
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
   
 0.955
ptges3
Prostaglandin E synthase 3b (cytosolic).
    
 0.932
LOC101161606
Prostaglandin E synthase 3a (cytosolic).
    
 0.932
LOC101167985
Si:ch211-1i11.3.
    
 0.924
map3k5
Mitogen-activated protein kinase kinase kinase 5.
    
 0.924
trap1
TNF receptor-associated protein 1.
   
 0.907
tsc1
TSC complex subunit 1b.
   
 0.905
ENSORLP00000031311
Uncharacterized protein.
   
 0.905
H2LGJ7_ORYLA
Si:ch211-131k2.3.
    
 0.904
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.