STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NUCB2Nucleobindin 2. (399 aa)    
Predicted Functional Partners:
LOC101167327
FAM20C golgi associated secretory pathway kinase.
    
 0.646
LOC101163577
FAM20C golgi associated secretory pathway kinase a.
    
 0.646
apln
Apelin.
      
 0.600
fam20a
FAM20A golgi associated secretory pathway pseudokinase.
     
  0.518
LOC110015368
Family with sequence similarity 20 member C, like.
    
 0.514
LOC101164404
Fam20C domain-containing protein.
    
 0.514
LOC101174576
Uncharacterized protein.
      
 0.501
LOC111946419
Peptide YYb.
      
 0.487
LOC101155694
Peptide YYa.
      
 0.472
dennd2b
Suppression of tumorigenicity 5.
      
 0.464
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.