STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUCB2Nucleobindin 2. (399 aa)    
Predicted Functional Partners:
LOC101174576
Uncharacterized protein.
      
 0.513
crh
Corticotropin-releasing hormone.
      
 0.476
lep-b
Leptin-B; May function as part of a signaling pathway that acts to regulate the size of the body fat depot.
      
 0.461
tbp
Uncharacterized protein.
      
 0.452
trh
Uncharacterized protein.
      
 0.449
LOC101167327
FAM20C golgi associated secretory pathway kinase.
    
 0.437
LOC101163577
FAM20C golgi associated secretory pathway kinase a.
    
 0.437
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.