Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2L736_ORYLAHistone H2B; Belongs to the histone H2B family. (132 aa)    
Predicted Functional Partners:
H2L747_ORYLA
Histone H2A; Belongs to the histone H2A family.
 
 0.786
LOC101170450
H2A histone family, member Y; Belongs to the histone H2A family.
   
 0.752
LOC101166735
H2A histone family, member Y2.
   
 0.752
ENSORLP00000026346
Histone H2A; Belongs to the histone H2A family.
 
 0.745
ENSORLP00000026871
Histone H2A; Belongs to the histone H2A family.
 
 0.745
ENSORLP00000042631
Histone H2A; Belongs to the histone H2A family.
 
 0.743
ENSORLP00000043593
Histone H2A; Belongs to the histone H2A family.
 
 0.742
H2L392_ORYLA
Histone H2A; Belongs to the histone H2A family.
 
 0.741
ENSORLP00000031006
Histone H2A; Belongs to the histone H2A family.
 
 0.740
ENSORLP00000035124
Histone H2A; Belongs to the histone H2A family.
 
 0.740
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.