Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101165394GRB2 related adaptor protein 2a. (283 aa)    
Predicted Functional Partners:
LOC101157091
PH domain-containing protein.
    
 0.941
gab1
GRB2-associated binding protein 1.
    
 0.932
gab2
GRB2-associated binding protein 2.
    
 0.931
usp8
Ubiquitin specific peptidase 8; Belongs to the peptidase C19 family.
    
 
 0.906
ptpn23
Protein tyrosine phosphatase, non-receptor type 23, a.
   
 0.905
LOC101167248
SH2 domain-containing protein.
   
 0.841
LOC101175393
Macrophage stimulating 1 receptor a.
    
 0.836
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.836
mst1r
Macrophage stimulating 1 receptor b.
    
 0.836
fyb1
Uncharacterized protein.
   
 0.832
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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