STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101162938AE binding protein 1. (987 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
    
  0.954
sys1
Protein SYS1 homolog; Involved in protein trafficking. Belongs to the SYS1 family.
    
 
 0.826
myl7
Uncharacterized protein.
      
 0.532
LOC101172288
Amyloid beta (A4) precursor protein b.
   
 
 0.524
LOC101174546
Uncharacterized protein.
   
  
 0.510
spint1
Serine peptidase inhibitor, Kunitz type 1 a.
   
  
 0.508
igf2r
Insulin-like growth factor 2 receptor.
   
 
 0.418
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.