Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101162938AE binding protein 1. (987 aa)    
Predicted Functional Partners:
sys1
Protein SYS1 homolog; Involved in protein trafficking. Belongs to the SYS1 family.
      
 0.805
gak
Cyclin G associated kinase.
     
  0.529
myl7
Uncharacterized protein.
   
  
 0.503
spint1
Serine peptidase inhibitor, Kunitz type 1 a.
      
 0.466
dbt
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
      
 0.464
LOC101160980
Zmp:0000001088; Belongs to the peptidase S1 family.
   
  
 0.451
LOC101161242
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
      
 0.444
LOC101172288
Amyloid beta (A4) precursor protein b.
    
 
 0.438
LOC101170788
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
   
  
 0.436
LOC101162676
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
      
 0.429
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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