STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xkrxXK-related protein. (486 aa)    
Predicted Functional Partners:
LOC101170577
Cytochrome b-245 light chain; Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide.
   
 0.805
ncf1
Neutrophil cytosolic factor 1.
   
 0.676
LOC101167081
NADPH oxidase organizer 1b.
   
 0.654
LOC101168893
Kell metallo-endopeptidase (Kell blood group).
     
 0.630
nox4
FAD-binding FR-type domain-containing protein.
 
  
 0.628
ENSORLP00000039308
Dual oxidase 2.
   
 
 0.627
ncf2
Neutrophil cytosolic factor 2.
   
 0.624
H2MTT2_ORYLA
NADPH oxidase activator 1.
   
 0.624
noxo1
NADPH oxidase organizer 1a.
   
 0.604
tbxas1
Thromboxane A synthase 1 (platelet); Belongs to the cytochrome P450 family.
   
  
 0.492
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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