STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
socs5Suppressor of cytokine signaling 5. (561 aa)    
Predicted Functional Partners:
eloc
Elongin C paralog b; Belongs to the SKP1 family.
    
 0.961
ELOB
Ubiquitin-like domain-containing protein.
    
 0.923
socs3
Suppressor of cytokine signaling 3a.
     
 0.821
socs3-2
Uncharacterized protein.
     
 0.821
CUL5
Cullin 5; Belongs to the cullin family.
   
 0.783
LOC101154889
Cullin 5; Belongs to the cullin family.
   
 0.783
socs6
Suppressor of cytokine signaling 6.
     
0.768
rnf7
Ring finger protein 7.
   
 0.765
cish
Cytokine-inducible SH2-containing protein.
     
0.759
LOC101164124
Suppressor of cytokine signaling 2.
     
0.759
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.