Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
socs5Suppressor of cytokine signaling 5. (561 aa)    
Predicted Functional Partners:
eloc
Elongin C paralog b; Belongs to the SKP1 family.
    
 0.984
ELOB
Ubiquitin-like domain-containing protein.
    
 0.930
CUL5
Cullin 5; Belongs to the cullin family.
   
 0.906
LOC101154889
Cullin 5; Belongs to the cullin family.
   
 0.906
rnf7
Ring finger protein 7.
   
 0.866
jak1
Tyrosine-protein kinase.
    
 0.839
LOC101168468
Tyrosine-protein kinase.
    
 0.785
tyk2
Tyrosine-protein kinase.
    
 0.785
LOC101175555
Tyrosine-protein kinase.
    
 0.785
LOC101157629
Tyrosine-protein kinase.
    
 0.785
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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