Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101155292Tetratricopeptide repeat domain 7A. (851 aa)    
Predicted Functional Partners:
fam126a
Family with sequence similarity 126 member A.
    
 
 0.863
efr3a
EFR3 homolog A (S. cerevisiae).
   
 
 0.852
efr3b
EFR3 homolog Bb (S. cerevisiae).
   
 
 0.777
LOC101166452
Uncharacterized protein.
   
 
 0.769
PI4KA
Phosphatidylinositol 4-kinase alpha.
   
 
 0.747
ENSORLP00000027534
Uncharacterized protein.
   
 
 0.747
ENSORLP00000032251
PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.747
ENSORLP00000039425
PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.747
tmed6
Transmembrane p24 trafficking protein 6.
      
 0.691
tmem150a
Transmembrane protein 150Aa.
      
 0.690
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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