STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101164721Creatine kinase, mitochondrial 1A; Belongs to the ATP:guanido phosphotransferase family. (417 aa)    
Predicted Functional Partners:
gamt
Guanidinoacetate N-methyltransferase; Converts guanidinoacetate to creatine, using S- adenosylmethionine as the methyl donor. Belongs to the class I-like SAM-binding methyltransferase superfamily. RMT2 methyltransferase family.
   
 
 0.930
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 
 0.692
LOC101167500
Myosin, light chain 1, alkali; skeletal, fast.
   
 
 0.588
mylpf
Myosin light chain, phosphorylatable, fast skeletal muscle a.
   
 
 0.542
hspb6
Heat shock protein, alpha-crystallin-related, b6; Belongs to the small heat shock protein (HSP20) family.
   
 
 0.524
LOC101163361
NDRG family member 2.
   
  
 0.510
GADL1
Glutamate decarboxylase like 1.
      
 0.507
aldoa
Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.
   
 
 0.430
LOC101163391
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
   
 
 0.426
H2LQV6_ORYLA
Uncharacterized protein.
   
 
 0.417
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.