STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101163960Cellular retinoic acid binding protein 1a; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (137 aa)    
Predicted Functional Partners:
cyp26a1
Cytochrome P450 26A1; Belongs to the cytochrome P450 family.
     
 0.525
ift80
Intraflagellar transport 80 homolog (Chlamydomonas).
     
 0.525
cyp26b1
Cytochrome P450 26B1; Belongs to the cytochrome P450 family.
     
 0.523
bbs4
Bardet-Biedl syndrome 4.
    
 0.507
ift81
Intraflagellar transport 81 homolog.
      
 0.503
bbs9
Bardet-Biedl syndrome 9.
      
 0.487
crym
Crystallin, mu.
   
  
 0.480
ppard
Uncharacterized protein.
    
 0.445
tuft1
Tuftelin 1a.
      
 0.421
LOC100049282
Retinoic acid receptor, alpha a.
    
 0.415
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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