STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101169696PID domain-containing protein. (190 aa)    
Predicted Functional Partners:
H2LUH7_ORYLA
Uncharacterized protein.
    
  0.920
H2ML08_ORYLA
Uncharacterized protein.
    
  0.920
megf10
Multiple EGF-like-domains 10.
    
 0.913
scarf1
Scavenger receptor class F, member 1.
    
 0.913
Stab2
Uncharacterized protein.
    
 0.913
LOC101171576
Multiple EGF-like-domains 11.
    
 0.913
LOC101159016
Uncharacterized protein.
    
 0.902
LOC101175028
Uncharacterized protein.
    
 0.902
gulp1
GULP PTB domain containing engulfment adaptor 1a.
     
 
0.900
appl2
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
   0.644
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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