STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sh3yl1SH3 and SYLF domain containing 1. (398 aa)    
Predicted Functional Partners:
mvk
Mevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily.
    
   0.832
was
WASP actin nucleation promoting factor a.
    
 
 0.832
wasl
Uncharacterized protein.
    
 
 0.832
LOC101170654
Uncharacterized protein.
      
 0.795
LOC101166592
Protein tyrosine phosphatase receptor type Na.
      
 0.795
LOC101173416
Uncharacterized protein.
    
 
 0.774
tmem53
Transmembrane protein 53.
      
 0.630
H2LU76_ORYLA
SH3 domain containing 19.
   
   0.623
LOC101175352
Uncharacterized protein.
   
   0.610
LOC101155936
NBR1 autophagy cargo receptor b.
   
  
 0.569
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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