Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sh3yl1SH3 and SYLF domain containing 1. (398 aa)    
Predicted Functional Partners:
nlrc5
NACHT domain-containing protein.
      
 0.894
H2LU76_ORYLA
SH3 domain containing 19.
    
   0.874
LOC101175352
Uncharacterized protein.
    
   0.874
LOC101170654
Uncharacterized protein.
      
 0.785
LOC101166592
Protein tyrosine phosphatase receptor type Na.
      
 0.785
LOC100049233
Androgen receptor beta subtype.
    
 
 0.746
ankrd54
Ankyrin repeat domain 54.
    
 
 0.746
was
WASP actin nucleation promoting factor a.
    
 
 0.744
wasl
Uncharacterized protein.
    
 
 0.744
vps37b
Zgc:114173.
    
   0.740
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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