STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RILPL1Rab interacting lysosomal protein like 1. (383 aa)    
Predicted Functional Partners:
ccnb3
Cyclin B3; Belongs to the cyclin family.
      
 0.662
RAB29
RAB29, member RAS oncogene family.
      
 0.616
RAB39B
RAB39B, member RAS oncogene family.
    
 0.604
rint1
RAD50 interactor 1.
      
 0.558
rab12
RAB12, member RAS oncogene family.
    
 0.517
LOC101166541
Oxysterol-binding protein; Belongs to the OSBP family.
   
 0.508
OSBPL1A
Oxysterol-binding protein; Belongs to the OSBP family.
   
 0.508
ENSORLP00000036222
ANK_REP_REGION domain-containing protein.
   
 0.508
LOC101158354
Oxysterol-binding protein; Belongs to the OSBP family.
   
 0.507
LOC101170760
Oxysterol-binding protein; Belongs to the OSBP family.
   
 0.507
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.