ikzf4 protein (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ikzf4

Uncharacterized protein. (549 aa)

Predicted Functional Partners:

rps26

0.693

chpf

0.656

LOC101174545

0.634

WDR33

0.621

dusp28

0.607

zc3h15

0.606

sft2d3

0.605

LOC101173972

0.605

crbn

0.604

dnajc22

0.532

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101173972	LOC101174545	ENSORLP00000009017	ENSORLP00000017723	Si:ch1073-184j22.1.	Si:dkey-69o16.5.	0.727
LOC101173972	WDR33	ENSORLP00000009017	ENSORLP00000008960	Si:ch1073-184j22.1.	WD repeat domain 33.	0.617
LOC101173972	dnajc22	ENSORLP00000009017	ENSORLP00000009560	Si:ch1073-184j22.1.	DnaJ (Hsp40) homolog, subfamily C, member 22.	0.492
LOC101173972	dusp28	ENSORLP00000009017	ENSORLP00000008464	Si:ch1073-184j22.1.	Dual specificity phosphatase 28.	0.734
LOC101173972	ikzf4	ENSORLP00000009017	ENSORLP00000001925	Si:ch1073-184j22.1.	Uncharacterized protein.	0.605
LOC101173972	rps26	ENSORLP00000009017	ENSORLP00000001910	Si:ch1073-184j22.1.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.482
LOC101173972	sft2d3	ENSORLP00000009017	ENSORLP00000008973	Si:ch1073-184j22.1.	Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family.	0.662
LOC101173972	zc3h15	ENSORLP00000009017	ENSORLP00000023256	Si:ch1073-184j22.1.	Zinc finger CCCH-type containing 15.	0.623
LOC101174545	LOC101173972	ENSORLP00000017723	ENSORLP00000009017	Si:dkey-69o16.5.	Si:ch1073-184j22.1.	0.727
LOC101174545	WDR33	ENSORLP00000017723	ENSORLP00000008960	Si:dkey-69o16.5.	WD repeat domain 33.	0.672
LOC101174545	dnajc22	ENSORLP00000017723	ENSORLP00000009560	Si:dkey-69o16.5.	DnaJ (Hsp40) homolog, subfamily C, member 22.	0.492
LOC101174545	dusp28	ENSORLP00000017723	ENSORLP00000008464	Si:dkey-69o16.5.	Dual specificity phosphatase 28.	0.848
LOC101174545	ikzf4	ENSORLP00000017723	ENSORLP00000001925	Si:dkey-69o16.5.	Uncharacterized protein.	0.634
LOC101174545	rps26	ENSORLP00000017723	ENSORLP00000001910	Si:dkey-69o16.5.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.483
LOC101174545	sft2d3	ENSORLP00000017723	ENSORLP00000008973	Si:dkey-69o16.5.	Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family.	0.753
LOC101174545	zc3h15	ENSORLP00000017723	ENSORLP00000023256	Si:dkey-69o16.5.	Zinc finger CCCH-type containing 15.	0.724
WDR33	LOC101173972	ENSORLP00000008960	ENSORLP00000009017	WD repeat domain 33.	Si:ch1073-184j22.1.	0.617
WDR33	LOC101174545	ENSORLP00000008960	ENSORLP00000017723	WD repeat domain 33.	Si:dkey-69o16.5.	0.672
WDR33	dnajc22	ENSORLP00000008960	ENSORLP00000009560	WD repeat domain 33.	DnaJ (Hsp40) homolog, subfamily C, member 22.	0.696
WDR33	dusp28	ENSORLP00000008960	ENSORLP00000008464	WD repeat domain 33.	Dual specificity phosphatase 28.	0.786