Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RELREL proto-oncogene, NF-kB subunit. (623 aa)    
Predicted Functional Partners:
LOC101162015
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.
   
 0.893
nfkbia
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.
   
 0.893
nfkb1
Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1.
   
 0.871
nfkb2
Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100).
   
 0.869
setd6
N-lysine methyltransferase SETD6; Protein-lysine N-methyltransferase. Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SETD6 subfamily.
    
 0.868
rps27a
Ribosomal protein S27a.
    
  0.826
nfkbie
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon.
   
 0.821
ikbkb
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.808
LOC101171857
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.808
LOC101172593
Tumor necrosis factor a (TNF superfamily, member 2).
   
 
 0.794
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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